Search results for "β‐dehydroamino acids"

showing 3 items of 3 documents

Conformational investigation of α,β-dehydropeptides. X. Molecular and crystal structure of Ac-ΔAla-NMe2 compared with those of Ac-L-Ala-NMe2, Ac-DL-A…

2002

A series of three homologous dimethyldiamides Ac-DeltaAla-NMe2, Ac-L-Ala-NMe2 and Ac-DL-Ala-NMe2 has been synthesized and the structures of these amides determined from single-crystal X-ray diffraction data. To learn more about the conformational preferences of compounds studied, the fully relaxed (phi-psi) conformational energy maps in vacuo (AM1) of Ac-DeltaAla-NMe2 and Ac-L-Ala-NMe2 were obtained, and the calculated minima reoptimized with the DFT/B3LYP/6-31G** method. The crystal-state results have been compared with the literature data. Ac-DeltaAla-NMe2 and other alpha,beta-dehydroamino acid dimethyldiamides, Ac-DeltaXaa-NMe2 adopt the conservative conformation of the torsion angles ph…

Models Moleculardehydroalanine derivativeProtein ConformationStereochemistryαPeptidedimethylamidesCrystal structureX‐ray crystallographyCrystallography X-RayBiochemistryEndocrinologyProtein structureMoleculeBeta (finance)crystal and molecular structuresalanine derivativesβ‐dehydroamino acidstheoretical calculationschemistry.chemical_classificationAlanineamino acid amidesAmino acidCrystallographydehydropeptideschemistryX-ray crystallographyPeptidesRamachandran plotJOURNAL OF PEPTIDE RESEARCH
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Conformational investigation of alpha,beta-dehydropeptides. VIII. N-acetyl-alpha,beta-dehydroamino acid N'-methylamides: conformation and electron de…

2009

The Fourier transform infrared spectra are analyzed in the regions of Vs(N-H), amide I, amide II and Vs(C alpha = C beta) bands for a series of Ac-delta Xaa-NHMe, where delta Xaa = delta Ala, (Z)-delta Abu, (Z)-delta Leu, (Z)-delta Phe and delta Val, to determine the predominant solution conformation of these alpha,beta-dehydropeptide-related molecules and the electron distribution perturbation in their amide bonds. The measurements were performed in dichloromethane (DCM). To confirm and rationalize the assignments, the spectra of the respective series of saturated Ac-Xaa-NHMe, recorded in DCM, and the spectra of these two series of unsaturated and saturated compounds, recorded in acetonitr…

Protein ConformationαAb initioElectronsBiochemistrychemistry.chemical_compoundEndocrinologyDehydroalanineComputational chemistryAb initio quantum chemistry methodsamidic resonanceAmideSpectroscopy Fourier Transform InfraredMoleculePeptide bondC5 hydrogen bondC5 conformationFourier transform infrared spectroscopyamide bond lengthβ‐dehydroamino acidsHydrogen bondab initio calculationsdehydroalanineAmidesMolecular WeightCrystallographyFTIR spectroscopychemistryPeptidesΔ‐electron conjugationThe journal of peptide research : official journal of the American Peptide Society
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Conformational investigation of α,β‐dehydropeptides. XV: N‐acetyl‐α,β‐dehydroamino acid N ′N ′‐dimethylamides: conformational properties from infrare…

2005

The FTIR spectra were analysed in the region of the nu(s)(N-H), AI(C=O) and nu(s)(Calpha=Cbeta) bands for a series of Ac-DeltaXaa-NMe2, where DeltaXaa = DeltaAla, (Z)-DeltaAbu, (Z)-DeltaLeu, (Z)-DeltaPhe and DeltaVal, to determine a predominant solution conformation of these alpha,beta-dehydropeptide-related molecules. Measurements were taken in CCl4, DCM and MeCN solutions. In the same way, spectra of saturated analogues Ac-Xaa-NMe2, where Xaa = Ala, Abu, Leu, Phe and Val, were investigated. To help interpret the spectroscopic results, conformational maps were calculated by the B3LYP/6-31+G** method. Also, the relative energies of all conformers of the dehydro compounds in vacuo as well as…

conformationStereochemistryProtein ConformationαPeptideamide/π(Ph) interactionBiochemistrySpectral linechemistry.chemical_compoundStructural BiologyAmideDrug DiscoverySpectroscopy Fourier Transform InfraredSide chainMoleculeC5 hydrogen bondFourier transform infrared spectroscopysolute/solvent interactionMolecular BiologyConformational isomerismβ‐dehydroamino acidsPharmacologychemistry.chemical_classificationChemistryHydrogen bondOrganic ChemistryGeneral MedicineModels TheoreticalAmidestheoretical IR frequenciesFTIR spectroscopyMolecular Medicinedensity functional theory calculationsPeptidesJournal of Peptide Science
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